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Cranberry and Pomegranate Cupcakes with Cream Cheese Frosting

By Beginnerbakes Editorial TeamPublished Apr 22, 2026 | Updated Oct 22, 2026
American Under review Beginner-friendlyEasyStep By StepWinter Baking

Spiced cranberry and pomegranate cupcakes with a cream-cheese and Greek-yogurt frosting.

Cranberry and Pomegranate Cupcakes with Cream Cheese Frosting
Prep Under review
Cook Under review
Total Under review
Servings 12
Difficulty easy
Cuisine American

Recipe Details

PrepUnder review
CookUnder review
TotalUnder review
Servings12
Difficultyeasy
CuisineAmerican
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Ingredients

Servings 12
  • 1 1/4 cups all-purpose flour
  • 1 teaspoon baking powder
  • 1/2 teaspoon baking soda
  • 1/4 teaspoon salt
  • 1 teaspoon ground cinnamon
  • 1/4 teaspoon ground nutmeg
  • 2 large eggs, at room temperature
  • 3/4 cup granulated sugar
  • 1/2 cup plain Greek yogurt (or low-fat yogurt)
  • 1/4 cup unsweetened applesauce
  • 1 teaspoon pure vanilla extract
  • 1/2 cup fresh or frozen cranberries (if frozen, do not thaw)
  • 1/4 cup pomegranate seeds, plus extra for garnish
  • 1/2 cup light cream cheese, softened
  • 1/4 cup nonfat Greek yogurt
  • 2 tablespoons powdered sugar
  • 1 teaspoon vanilla extract

Instructions

  1. Preheat your oven to 350 degrees F (175 degrees C). Line a 12-cup muffin tin with cupcake liners.
  2. In a medium bowl, whisk together the flour, baking powder, baking soda, salt, cinnamon, and nutmeg until well combined.
  3. In a large bowl, beat the eggs and sugar with a hand mixer or whisk until the mixture is pale and slightly fluffy, about 2 minutes.
  4. Add the Greek yogurt, applesauce, and vanilla extract. Mix well until smooth and creamy.
  5. Gradually add the dry ingredients to the wet ingredients, gently folding with a spatula just until combined. Avoid overmixing to keep cupcakes tender.
  6. Fold in the cranberries and pomegranate seeds evenly, being careful not to break the fruit too much.
  7. Spoon the batter evenly into the cupcake liners, filling each about 3/4 full.
  8. Bake for 18-22 minutes, or until a toothpick inserted in the center comes out clean.
  9. Cool in the pan for 5 minutes, then transfer to a wire rack to cool completely.
  10. To make the frosting, beat the softened cream cheese, Greek yogurt, powdered sugar, and vanilla extract together until smooth and creamy.
  11. Once fully cooled, spread or pipe the cream-cheese and yogurt frosting on top.
  12. Garnish with a few fresh pomegranate seeds for a festive touch.
  13. Serve immediately or store cupcakes in an airtight container in the refrigerator for up to 3 days.
Cranberry and Pomegranate Cupcakes with Cream Cheese Frosting
Cranberry and Pomegranate Cupcakes with Cream Cheese Frosting

Timing

Allow for preparation, preheating, 18-22 minutes baking, 5 minutes in-pan cooling, complete rack cooling and frosting.

Storage

Refrigerate frosted cupcakes in an airtight container for up to 3 days.

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